年別の研究成果
年別の研究成果
検索結果
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2024
Catalytic cleave of an RNA substrate that bypasses the reorganization of its secondary structure during substrate recognition by a trans-acting VS ribozyme
Miyzaki, Y., Nakane, R., Tanishi, S., Matsumura, S. & Ikawa, Y., 2024, (受理済み/印刷中) In: Nucleosides, Nucleotides and Nucleic Acids.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
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Improvement of the structural and functional stability for the Tetrahymena group I ribozyme through mutation of the sequences within its catalytic core
Ayesha Siddika, M., Dobirul Islam, M., Marumo, N., Matsumura, S. & Ikawa, Y., 2024.研究成果: 会議への寄与 › 学会発表
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In droplet evolution of the fluorescent RNA aptamer “Pepper” using droplet microfluidics
Matsumura, S., Horiuchi, R., Koyama, T. & Ikawa, Y., 2024.研究成果: 会議への寄与 › 学会発表
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2023
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Expanding ribozyme nanostructures through assembly of a cyclic trimer of modular ribozymes
Ikawa, Y., Ayesha Siddika, M., Hidaka, K., Sugiyama, H., Endo, M. & Matsumura, S., 2023.研究成果: 会議への寄与 › 学会発表
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Pairwise Engineering of Tandemly Aligned Self-Splicing Group I Introns for Analysis and Control of Their Alternative Splicing
Ueda, T., Nishimura, K. I., Nishiyama, Y., Tominaga, Y., Miyazaki, K., Furuta, H., Matsumura, S. & Ikawa, Y., 2023/04, In: Biomolecules. 13, 4, 654.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
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Spontaneous division of information and function during in quasi-cell RNA evolution
Matsumura, S., Terada, K., Hirota, Y., Ehara, M. & Ikawa, Y., 2023.研究成果: 会議への寄与 › 学会発表
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Structural Expansion of Catalytic RNA Nanostructures through Oligomerization of a Cyclic Trimer of Engineered Ribozymes
Siddika, M. A., Oi, H., Hidaka, K., Sugiyama, H., Endo, M., Matsumura, S. & Ikawa, Y., 2023/09, In: Molecules. 28, 18, 6465.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
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2022
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A Hexameric Ribozyme Nanostructure Formed by Double-Decker Assembly of a Pair of Triangular Ribozyme Trimers
Yu, K., Hidaka, K., Sugiyama, H., Endo, M., Matsumura, S. & Ikawa, Y., 2022/03/18, In: ChemBioChem. 23, 6, e202100573.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
3 被引用数 (Scopus) -
Box-shaped ribozyme octamer formed by face-to-face dimerization of a pair of square-shaped ribozyme tetramers
Islam, M. D., Hidaka, K., Suzuki, Y., Sugiyama, H., Endo, M., Matsumura, S. & Ikawa, Y., 2022/09, In: Journal of Bioscience and Bioengineering. 134, 3, p. 195-202 8 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
Open Access2 被引用数 (Scopus) -
Catalytic RNA Oligomers Formed by Co-Oligomerization of a Pair of Bimolecular RNase P Ribozymes
Siddika, M. A., Yamada, T., Aoyama, R., Hidaka, K., Sugiyama, H., Endo, M., Matsumura, S. & Ikawa, Y., 2022/12, In: Molecules. 27, 23, 8298.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
Open Access1 被引用数 (Scopus) -
In quasi-cell evolution of an RNA-cleaving ribozyme using droplet screening integrated devices
Matsumura, S., Imai, T., Ehara, M., Nishiyama, Y. & Ikawa, Y., 2022.研究成果: 会議への寄与 › 学会発表
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2021
Analysis of unknown functional RNAs emerging during in droplet ribozyme evolution
寺田 海舟, 荏原 基力, 井川 善也 & 松村 茂祥, 2021.研究成果: 会議への寄与 › 学会発表
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An rna triangle with six ribozyme units can promote a trans-splicing reaction through trimerization of unit ribozyme dimers
Akagi, J., Yamada, T., Hidaka, K., Fujita, Y., Saito, H., Sugiyama, H., Endo, M., Matsumura, S. & Ikawa, Y., 2021/03/02, In: Applied Sciences (Switzerland). 11, 6, 2583.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
Open Access3 被引用数 (Scopus) -
Effects of chain length of polyethylene glycol molecular crowders on a mutant Tetrahymena group I ribozyme lacking large peripheral module
Dobirul Islam, M., Motiar Rahman, M., Matsumura, S. & Ikawa, Y., 2021, In: Nucleosides, Nucleotides and Nucleic Acids. 40, 9, p. 867-883 17 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
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Flexible Assembly of Engineered Tetrahymena Ribozymes Forming Polygonal RNA Nanostructures with Catalytic Ability
Mori, Y., Oi, H., Suzuki, Y., Hidaka, K., Sugiyama, H., Endo, M., Matsumura, S. & Ikawa, Y., 2021/06/15, In: ChemBioChem. 22, 12, p. 2168-2176 9 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
5 被引用数 (Scopus) -
Functional analysis of a novel VS ribozyme variant obtained by experimental evolution
今井 巴絵, 荏原 基力, 井川 善也 & 松村 茂祥, 2021.研究成果: 会議への寄与 › 学会発表
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VSリボザイムの進化実験により得られたリボザイム配列類似型・非切断RNAの機能解析
野口 唱, 寺田 海舟, 荏原 基力, 井川 善也 & 松村 茂祥, 2021.研究成果: 会議への寄与 › 学会発表
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2020
Catalytic RNA nano-objects formed by self-assembly of group I ribozyme dimers serving as unit structures
Kiyooka, R., Akagi, J., Hidaka, K., Sugiyama, H., Endo, M., Matsumura, S. & Ikawa, Y., 2020/09, In: Journal of Bioscience and Bioengineering. 130, 3, p. 253-259 7 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
1 被引用数 (Scopus) -
Effects of external molecular factors on adaptation of bacterial RNase P ribozymes to thermophilic conditions
Rahman, M. S., Matsumura, S. & Ikawa, Y., 2020/03/05, In: Biochemical and Biophysical Research Communications. 523, 2, p. 342-347 6 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
Open Access3 被引用数 (Scopus) -
Importance of a vertically tilting structure for energizing the North Atlantic Oscillation.
Martineau, P., Nakamura, H., Kosaka, Y., Yamamoto & A., 2020, In: Scientific Reports. 10, 1, p. 12671-12671研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
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Polyethylene glycol molecular crowders enhance the catalytic ability of bimolecular bacterial RNase P ribozymes
Rahman, M. S., Gulshan, M. A., Matsumura, S. & Ikawa, Y., 2020/05/03, In: Nucleosides, Nucleotides and Nucleic Acids. 39, 5, p. 715-729 15 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
Open Access5 被引用数 (Scopus) -
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2019
Oligomerization of a modular ribozyme assembly of which is controlled by a programmable RNA–RNA interface between two structural modules
Tsuruga, R., Uehara, N., Suzuki, Y., Furuta, H., Sugiyama, H., Endo, M., Matsumura, S. & Ikawa, Y., 2019/10, In: Journal of Bioscience and Bioengineering. 128, 4, p. 410-415 6 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
9 被引用数 (Scopus) -
Rational design of an orthogonal pair of bimolecular rnase p ribozymes through heterologous assembly of their modular domains
Nozawa, Y., Hagihara, M., Rahman, M. S., Matsumura, S. & Ikawa, Y., 2019/09, In: Biology. 8, 3, 65.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
Open Access4 被引用数 (Scopus) -
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2018
Biogenic triamine and tetraamine activate core catalytic ability of Tetrahymena group I ribozyme in the absence of its large activator module
Gulshan, M. A., Rahman, M. M., Matsumura, S., Higuchi, T., Umezawa, N. & Ikawa, Y., 2018/02/05, In: Biochemical and Biophysical Research Communications. 496, 2, p. 594-600 7 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
8 被引用数 (Scopus) -
Comparative study of polyethylene polyamines as activator molecules for a structurally unstable group I ribozyme
Gulshan, A., Matsumura, S., Higuchi, T., Umezawa, N. & Ikawa, Y., 2018, In: Bioscience, biotechnology, and biochemistry. 82, 8, p. 1404-1407 4 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
Open Access1 被引用数 (Scopus) -
Distinct modulation of group I ribozyme activity among stereoisomers of a synthetic pentamine with structural constraints
Gulshan, M. A., Tsuji, K., Matsumura, S., Higuchi, T., Umezawa, N. & Ikawa, Y., 2018/10/12, In: Biochemical and Biophysical Research Communications. 504, 4, p. 698-703 6 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
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Effects of molecular crowding on a bimolecular group I ribozyme and its derivative that self-assembles to form ribozyme oligomers
Rahman, M. M., Matsumura, S. & Ikawa, Y., 2018/12/09, In: Biochemical and Biophysical Research Communications. 507, 1-4, p. 136-141 6 p.研究成果: ジャーナルへの寄稿 › 学術論文 › 査読
6 被引用数 (Scopus) -
Engineered group i ribozymes as RNA-based modular tools to control gene expression
Ikawa, Y. & Matsumura, S., 2018/04/10, Applied RNA Bioscience. Springer Singapore, p. 203-220 18 p.研究成果: 書籍の章/レポート/会議録 › 章 › 査読
3 被引用数 (Scopus)