TY - JOUR
T1 - Hydrogen-bond network and pH sensitivity in transthyretin
T2 - Neutron crystal structure of human transthyretin
AU - Yokoyama, Takeshi
AU - Mizuguchi, Mineyuki
AU - Nabeshima, Yuko
AU - Kusaka, Katsuhiro
AU - Yamada, Taro
AU - Hosoya, Takaaki
AU - Ohhara, Takashi
AU - Kurihara, Kazuo
AU - Tomoyori, Katsuaki
AU - Tanaka, Ichiro
AU - Niimura, Nobuo
N1 - Funding Information:
This work was supported by the Ibaraki prefectural government and by a Grant-in-Aid for Young Scientists (B) (Project No. 21770159). This study was also supported by Grants-in-Aid for Scientific Research on Priority Areas and for Scientific Research on Innovative Areas from the Ministry of Education, Culture, Sports, Science, and Technology of Japan.
PY - 2012/2
Y1 - 2012/2
N2 - Transthyretin (TTR) is a tetrameric protein associated with human amyloidosis. In vitro, the formation of amyloid fibrils by TTR is known to be promoted by low pH. Here we show the neutron structure of TTR, focusing on the hydrogen bonds, protonation states and pH sensitivities. A large crystal was prepared at pD 7.4 for neutron protein crystallography. Neutron diffraction studies were conducted using the IBARAKI Biological Crystal Diffractometer with the time-of-flight method. The neutron structure solved at 2.0. å resolution revealed the protonation states of His88 and the detailed hydrogen-bond network depending on the protonation states of His88. This hydrogen-bond network is composed of Thr75, Trp79, His88, Ser112, Pro113, Thr118-B and four water molecules, and is involved in both monomer-monomer and dimer-dimer interactions, suggesting that the double protonation of His88 by acidification breaks the hydrogen-bond network and causes the destabilization of the TTR tetramer. In addition, the comparison with X-ray structure at pH 4.0 indicated that the protonation occurred to Asp74, His88 and Glu89 at pH 4.0. Our neutron model provides insights into the molecular stability of TTR related to the hydrogen-bond network, the pH sensitivity and the CH···O weak hydrogen bond.
AB - Transthyretin (TTR) is a tetrameric protein associated with human amyloidosis. In vitro, the formation of amyloid fibrils by TTR is known to be promoted by low pH. Here we show the neutron structure of TTR, focusing on the hydrogen bonds, protonation states and pH sensitivities. A large crystal was prepared at pD 7.4 for neutron protein crystallography. Neutron diffraction studies were conducted using the IBARAKI Biological Crystal Diffractometer with the time-of-flight method. The neutron structure solved at 2.0. å resolution revealed the protonation states of His88 and the detailed hydrogen-bond network depending on the protonation states of His88. This hydrogen-bond network is composed of Thr75, Trp79, His88, Ser112, Pro113, Thr118-B and four water molecules, and is involved in both monomer-monomer and dimer-dimer interactions, suggesting that the double protonation of His88 by acidification breaks the hydrogen-bond network and causes the destabilization of the TTR tetramer. In addition, the comparison with X-ray structure at pH 4.0 indicated that the protonation occurred to Asp74, His88 and Glu89 at pH 4.0. Our neutron model provides insights into the molecular stability of TTR related to the hydrogen-bond network, the pH sensitivity and the CH···O weak hydrogen bond.
KW - Amyloidosis
KW - Hydrogen-bond network
KW - Neutron protein crystallography
KW - Protonation state
KW - Structure stability
KW - Transthyretin
UR - http://www.scopus.com/inward/record.url?scp=84857031868&partnerID=8YFLogxK
U2 - 10.1016/j.jsb.2011.12.022
DO - 10.1016/j.jsb.2011.12.022
M3 - 学術論文
C2 - 22248451
AN - SCOPUS:84857031868
SN - 1047-8477
VL - 177
SP - 283
EP - 290
JO - Journal of Structural Biology
JF - Journal of Structural Biology
IS - 2
ER -